Archives for category: News

By creating genetically engineered fish, two independent groups have identified genes in an autism hotspot on chromosome 16 that influence head size and brain development. One of the studies appears today in Nature.

A 29-gene stretch of chromosome 16 known as 16p11.2, or 16p, is deleted or duplicated in roughly one percent of individuals with autism and duplicated in some individuals with schizophrenia. Researchers have struggled to sort out which genes in the region contribute to features of these disorders.

Using zebrafish allows for an unbiased screen of individual genes, says Nicholas Katsanis, professor of cell biology at Duke University in Durham, North Carolina, and lead investigator of the Nature study. “We tested all of them with exactly same protocol, with no prior expectation of what we were going to find,” he says.

His study shows that suppressing a little-known gene called KCTD13 in zebrafish leads to a 20 percent increase in head size. Conversely, expressing too much of the gene leads to a 20 percent decrease in head size.

This seems to mirror what happens in people. Individuals lacking one copy of 16p often have abnormally large heads, dubbed macrocephaly, whereas those with an extra copy tend to have abnormally small heads, or microcephaly.

Read more at…

SFARI, May 2012.

Children with autism carry twice as many new and damaging genetic mutations as typically developing children, according to a large study published today in Neuron.

Michael Wigler, professor at Cold Spring Harbor Laboratory in New York, and his collaborators sequenced the exome, or protein-coding parts of the genome, using DNA isolated from blood cells from 343 children with autism and their family members. The findings lend statistical heft to three other exome-sequencing studies published inNature earlier this month.

“This fourth Musketeer is the largest of all four, and really puts the nail in the coffin” regarding the abundance of damaging mutations in autism, says Jonathan Sebat, associate professor of psychiatry and cellular and molecular medicine at the University of California, San Diego, who was a postdoctoral fellow in Wigler’s laboratory but was not involved in the new work.

The new study, as well as two of the older papers, tapped into the Simons Simplex Collection (SSC), a genetic and medical repository of some 2,700 families with only one child with autism and unaffected siblings and parents.

Unlike the other three papers, the new one also identified intriguing genetic links between autism and fragile X syndrome, the most common inherited form of intellectual disability. An estimated one-third of children with fragile X are also diagnosed with autism.

Read more at…

SFARI, April 2012.

Children with autism don’t follow certain grammatical rules, according to one of the few studies of the disorder from the field of linguistics.

Autism’s bafflingly diverse array of language deficits — from word repetition to unusual syllable stresses to speaking in a monotone or sing-songy voice or not at all — has always been a hot topic of research. But the vast majority of studies in the past 30 years have focused on semantics, or the meaning of words, and pragmatics, the way that intentions, implications, history and other subtle social contexts affect meaning.

In contrast, the new study, published online 21 March in Applied Psycholinguistics, is one of a handful to look at autism and syntax, or the rules that govern how sentences are structured. The researchers found that children with autism don’t understand reflexive pronouns such as ‘himself’ and ‘herself.’

“What we’re arguing here is that autistic kids have some real grammatical deficits, not just communication deficits,” says lead investigator Ken Wexler, professor of brain and cognitive science at the Massachusetts Institute of Technology.

This distinction is important, he adds, because many computational linguists, including Wexler himself, believe that grammatical abilities are controlled by specific, innate structures in the brain, whereas semantic and pragmatic skills are more complicated and learned over time. Sorting out which deficits are common in autism could shed light on the brain systems derailed in the disorder.

Read more at…

SFARI, April 2012.

Child abuse, losing your job, a nasty divorce—many types of stress have been associated with serious illnesses, from addiction and depression to diabetes and even cancer.

But how, exactly, does stress change the brain? Using magnetic resonance imaging (MRI), two new studies have linked stress to a reduction in the volume of nerve cells, or gray matter, in the prefrontal cortex (PFC), a region that controls emotions, abstract thinking, and impulses. Understanding how these changes develop over time could help researchers identify individuals most vulnerable to stress, the researchers say. Ideally these patients could be steered toward exercise, social support, and other clinical interventions known to offset the harmful effects of stress.

“When you go to your physician’s office, you might get your insulin levels checked out, and your doctor will use it to recommend treatments,” says Rajita Sinha, Ph.D., Foundations Fund Professor of Psychiatry and director of the Yale Stress Center, who was involved in the new studies. “We need to be able to get there with the brain, to treat it just like any other organ system.”

Read more at…

Medicine@Yale, March 2012.

Children with autism who have different verbal and intellectual abilities seem to glean useful social information from different parts of the face, according to the largest-ever eye-tracking study of the disorder.

These differences suggest that children with autism adapt to their environment based on their specific strengths and weaknesses, the researchers say.

The findings, published in the March issue of the Journal of the American Academy of Child and Adolescent Psychiatry, illustrate both the importance and the challenges of studying differences among people with autism.

“Different people have different compensatory strategies to navigate the demands of social life,” says lead investigator Ami Klin, chief of the division of autism and related disorders at Emory University School of Medicine in Atlanta.

Experts applaud the study for taking an approach that’s only beginning to gain traction in the autism field: parsing the notoriously diverse disorder into smaller groups of children that share a particular trait, such as verbal ability. Doing so could help pinpoint new imaging or genetic biomarkers, and could help clinicians choose effective treatments, researchers say.

“The study highlights that any interventions that are used need to be specific to the child in question,” says Gwyneth Doherty-Sneddon, professor of psychology at Northumbria University in the U.K., who was not involved with the new study. “There are important individual differences, so an intervention that might work well with one group of children is not going to work well with another group.”

Read more at…

SFARI, March 2012.

In a mouse model of Alzheimer’s disease, memory problems stem from an overactive enzyme that shuts off genes related to neuron communication, a new study says.

When researchers genetically blocked the enzyme, called HDAC2, they ‘reawakened’ some of the neurons and restored the animals’ cognitive function. The results, published February 29, 2012, in the journal Nature, suggest that drugs that inhibit this particular enzyme would make good treatments for some of the most devastating effects of the incurable neurodegenerative disease.

“It’s going to be very important to develop selective chemical inhibitors against HDAC2,” says Howard Hughes Medical Institute investigator Li-Huei Tsai, whose team at the Massachusetts Institute of Technology performed the experiments. “If we could delay the cognitive decline by a certain period of time, even six months or a year, that would be very significant.”

Read more at…

HHMI News, February 2012.

The development of white matter tracts, the nerve bundles that join one brain region to another, is different in babies who go on to develop autism compared with those who do not, according to a new study.

Researchers scanned the brains of infant siblings of children with autism — who have an increased risk of developing the disorder themselves — several times during their first two years of life. The so-called ‘baby sibs’ who go on to receive a diagnosis of autism at 24 months of age have distinct brain patterns at 6 months and abnormal neural development from 6 to 24 months, according to the study. The results were published 17 February in the American Journal of Psychiatry.

“The story is that autism is an unfolding process, not something that happens in the third trimester and then is done,” says lead investigator Joseph Piven, professor of psychiatry at the University of North Carolina-Chapel Hill. “We see the brain changing over time in a dynamic way.”

Read more at…

SFARI, February 2012.

By screening the genomes of hundreds of people with autism and analyzing the effect of newly identified mutations in cultured neurons, researchers have clarified the disorder’s complex link to a gene called SHANK2.

Functional mutations in SHANK2 crop up about twice as often in individuals with autism as in typical controls, according to a study published 9 February in PLoS Genetics.

The SHANK2 protein buttresses the synapse, or junction between neurons. The new findings add to already robust evidence from genetic studies and animal models that synaptic proteins — notably SHANK3, neurexins and neuroligins — are important in autism, the researchers say.

But a more surprising finding helps to explain why not everyone who has a SHANK2 mutation has autism. The three individuals with autism known to carry SHANK2 deletions also carry rare deletions or duplications — so-called copy number variations, or CNVs — in an autism-linked segment of chromosome 15. This supports the idea that autism arises not from a single genetic glitch, but from multiple hits to the genome.

“I think many people are still thinking about the genome like the old black-and-white movies from the 1950s: The good guy was in white, the bad guy was in black, and everybody knew what was going on,” says lead investigator Thomas Bourgeron, professor of genetics at the University of Paris Diderot.

But studies like this show that a ‘bad’ genetic glitch isn’t necessarily the only bad guy.

“When we find a single mutation in a patient with autism, we can’t say that we’re done,” Bourgeron says. “We still have to work on the whole genome of these patients to understand exactly what’s going on.”

Read more at…

SFARI, February 2012.

Head movements taint the results of many brain imaging studies, particularly those analyzing children or individuals with autism. That’s the sobering message from two independent studies published over the past few months in NeuroImage.

Both reports analyze so-called ‘resting-state functional connectivity’ studies: the increasingly popular five-minute brain scans that measure synchrony between different regions when the brain is at rest.

Together, they call into question high-profile findings published in the past couple of years showing that short-range connections in the brain start off strong in children and weaken over the course of typical development, while long-range connections begin weak in children and strengthen over time.

In a study published 14 October, researchers reanalyzed data from several of their own functional connectivity studies after correcting for head motion and found that this maturation pattern usually disappears once head motion is taken into account.

“It really, really, really sucks. My favorite result of the last five years is an artifact,” says lead investigator Steve Petersen, professor of cognitive neuroscience at Washington University in St. Louis.

It’s unclear how many published results head motion has skewed, and whether this changes the bottom-line conclusions. But many researchers are concerned.

“It’s going to impact some findings with regard to the robustness, but whether it completely wipes out the findings that are out there is another question,” says Damien Fair, assistant professor of behavioral neuroscience and psychiatry at Oregon Health and Science University. “It is going to require folks to reanalyze their data, controlling for these new ways of examining motion.”

Read more at…

SFARI, January 2012.