Archives for the month of: April, 2010

Two independent teams have identified the genetic culprits of three rare, inherited diseases by sequencing the genomes of several members of the same family. One of the studies appears today inScience.

As the cost of whole-genome sequencing plummets, this family-based approach will reveal candidate genes not just for rare diseases but for common, complex disorders such as autism, experts say.

“It really shows the power of the technology,” notes Michael Zwick, assistant professor of human genetics at Emory University, who was not involved with either study.

Zwick’s team is searching for genetic causes of autism by sequencing the X chromosome in boys with the disorder. “Whole-genome sequencing is certainly on the near horizon for autism,” Zwick says.

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SFARI, April 2010.

In the autism world, oxytocin is hot — it’s one of the only strong candidates for treatment — but if you believe one group of researchers, some of the most talked-about data is more smoke than fire.

Several highly publicized reports have shown that, for people with autism, inhaling oxytocin improves social impairments, repetitive behaviors and the ability to recognize emotions.

Others have shown that carrying certain common variants of the oxytocin receptor gene, OXTR, ups the risk of developing autism.

According to a team of European researchers, these associations may be just flukes.

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SFARI, April 2010.

People with autism are known to be rigid, often sticking to strict schedules and reacting poorly even to small changes in their daily routines. Could their inability to change plans be part of a broader cognitive problem?

Planning — the ability to prepare for an event and adapt to new information — has been widely studied in people with autism. But despite dozens of studies, researchers have not been able to agree on whether people with autism have trouble with planning skills. A new report suggests that the inconsistency in results may be because of differences in short-term memory.

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SFARI, April 2010.

Sometimes, the best way to learn about children with autism is to take a careful look at their parents.

It turns out that many parents, even if they aren’t diagnosed with autism, show some mild traits of the disorder. Ongoing research on this group — labeled with the ‘broad autism phenotype’, or BAP — suggests that the genetic underpinnings that lead to language or social problems can manifest in very different ways.

On Monday morning at the Keystone symposium on autism, in Snowbird, Utah, Joe Piven discussed one such study he published last year.

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SFARI, April 2010.

Brain cells are in constant motion. Ions rush in and out of synapses, the nubs that transmit messages between neurons, and trigger hundreds of protein interactions. Somehow, this chain of signals travels down neuronal branches to the cell body, where it can affect the expression of thousands of genes.

To study these complex networks, scientists typically zero in on one gene — or even a part of a gene — at a time, then gradually work backwards to figure out what turned it on, when and why.

That targeted approach seems ridiculously tedious compared with a new method that gives scientists the ability to simultaneously measure expression of the entire genome. A study applying the technique in brain cells is described today in Nature.

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SFARI, April 2010.

We’re making rapid strides in understanding the brain, but we still know little about what genetic or molecular problems cause mental illnesses.

There hasn’t been a new schizophrenia drug in 50 years, or a depression drug in 20. Nor are there any drugs to improve thehallmark symptoms of autism.

This “frustrating lack of progress” has prompted several big names in psychiatry and genetics — including Nobel Laureates Eric Kandeland Jim Watson — to call for a 10-year international scheme that would combine the latest in genetics and animal research to combat psychiatric diseases.

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SFARI, April 2010.

In the past year or two, we’ve seen the launch of dozens of studies analyzing the genomes of thousands of people with autism. The data — at least in aggregate form — is incredibly valuable to researchers. The participants, on the other hand, are almost always kept in the dark about their own DNA.

That lack of data disclosure is ethically worrisome to many researchers and participants, according to a comprehensive survey published 17 March in the European Journal of Human Genetics.

The prevailing consensus among bioethicists is that the participants of a study should be given genomic information when it has a clear effect on their health or well-being.

But the survey authors argue that it may not be possible — or appropriate — to apply the same guideline to all genomic studies.

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SFARI, April 2010.

Last month, I wrote about a remarkable study showing a genetic connection between obesity and autism. Rare deletions on chromosome 16, it turns out, crop up in a whopping three percent of individuals who are both obese and have a developmental delay.

This begs the question: How many people with autism are also obese?

There’s scant data to address that, but two studies published earlier this year begin to give a rigorous account.

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SFARI, April 2010.

The human brain holds a mind-boggling 100 billion neurons. And each of those cells makes anywhere from 1,000 to 10,000 connections to other neurons.

Imagine, then, the painstaking task of mapping out this complicated wiring diagram. That’s the lofty goal of the Human Connectome Project, a $30 million scheme sponsored by the National Institutes of Health. The agency is reviewing proposals and expects to start funding them by July.

Ever since the famous lesion studies of the 19th century, we’ve learned a lot about the 100 or so distinct regions of the brain, from the spot above the ear that allows us to speak to the area in the back of the head that activates when our eyes see light. But scientists say the real challenge is to understand how these regions connect.

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SFARI, April 2010.